Section: Dissemination

Teaching - Supervision - Juries

Teaching

• Licence : A. Mucherino, R. Andonov, Graph algorithms, 90h, L3, Univ. Rennes 1, Rennes France.

• Licence : C. Lemaitre, Statistics for biology, 10h, L3, Univ. Rennes 1, France

• Licence: D. Lavenier, Architecture and System, 36h, MIT1, ENS Rennes

• Licence : M. Le Boudic-Jamin, Preparation to C2I level 1 , 44h, L1, Univ. Rennes 1, France

• Master : D. Lavenier, Intensive Computation of Genomic Data, 18h, ESEO, M1, Angers

• Master : C. Lemaitre, P. Peterlongo, Text algorithmics for Bioinformatics, 46 h, M1, Univ. Rennes 1, France.

• Master : C. Lemaitre, Dynamical systems for biological networks, 22h, M2, Univ. Rennes 1, France

• Master : R. Andonov, A. Mucherino, Operations research, 95h, M1, Univ. Rennes 1, France.

• Master : R. Andonov, Advanced algorithms, 15h, M1, Univ. Rennes 1, France.

• Master : A. Mucherino, Initiation to systems and networks, 39h, M2, Univ. Rennes 1, France

• Master : A. Mucherino, R. Andonov, P. Peterlongo, Sequence and structure algorithms, 36h, M2, Univ. Rennes 1, France

Supervision

• PhD defense : Nicolas Maillet, Comparaison de novo de données de séquençage issues de très grands échantillons métagénomiques»[11] , Univ. Rennes 1, defended on December 19th 2013, supervised by D. Lavenier and P. Peterlongo [online manuscript: http://tel.archives-ouvertes.fr/tel-00941922]

• PhD defense : Guillaume Chapuis, Exploiting parallel features of modern computer architectures in bioinformatics : Applications to genetics, structure comparison and large graph analyses[10] , Univ. Rennes 1, defended on December 18th 2013, supervised by D. Lavenier and R. Andonov [online manuscript: http://tel.archives-ouvertes.fr/tel-00912553]

• PhD in progress : Mathilde Le Boudic-Jamin, Structure et comparaison d'objets 3D: applications aux structures protéiques, Univ. Rennes 1, started in October 2011, supervised by R. Andonov

• PhD in progress : Erwan Scaon, Modèles et algorithmes pour l'assemblage de novo de génomes à forte redondance, Univ. Rennes 1, started in October 2012, supervised by D. Lavenier and C. Lemaitre

• PhD in progress : François Moreews, Environnement intégré de conception et d’exécution de workflows en bioinformatique: du prototypage au calcul intensif. Applications à la recherche de motifs de régulation dans les génomes, Univ. Rennes 1, started in November 2012, supervised by D. Lavenier and S. Lagarigue

Juries

• President of Ph-D thesis jury. J. Lai, University of Rennes [D. Lavenier], O. Abdou-Arbi, University of Rennes 1 [R. Andonov]

• Member of Ph-D thesis juries. V. Silva Da Costa, Federal University of Rio de Janeiro (Brazil) [A. Mucherino]; R. Santos Alves, UNICAMP (Brazil) [A. Mucherino]; G. Chapuis, University of Rennes [D. Lavenier, R. Andonov]; Nicolas Maillet, University of Rennes [D. Lavenier, P. Peterlongo]; C. Yupeng, Nanyang Technological University, Singapor [D. Lavenier].

• Member of Ph-D thesis comitees. J. Boutte, University of Rennes [D. Lavenier]; A. Jeannin, University of Brest [D. Lavenier]; P. Nouhaud, University of Rennes [C. Lemaitre]; C. Mercier, University of Grenoble [C. Lemaitre]; S. Guizard, University of Tours [C. Lemaitre], A. Radulescu, university of Nantes [P. Peterlongo].